2egv.1 | SWISS-MODEL Template Library

SMTL ID : 2egv.1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-dimer

Ligands

2 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1:	18 residues within 4Å: Chain A: L.161, D.162, N.163, F.164, V.184, G.185, P.186, E.187, G.189, V.206, L.207, L.208, Y.211, T.212, L.213, T.215, A.218 Chain B: Q.133 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:L.161, A:G.185, A:F.190, A:L.208, A:L.208, A:T.212, A:T.212, A:L.213 Water bridges: A:N.163, A:N.163
SAM.2:	19 residues within 4Å: Chain A: Q.133 Chain B: L.161, D.162, N.163, F.164, V.184, G.185, P.186, E.187, G.189, V.206, L.207, L.208, Y.211, T.212, L.213, R.214, T.215, A.218 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:L.161, B:N.163, B:G.185, B:F.190, B:L.208, B:L.208, B:L.213 Water bridges: B:N.163, B:T.212

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Dong, X. et al., Crystal structure of rRNA methyltransferase with SAM ligand. To be Published

Release Date

2007-09-04

Peptides

UPF0088 protein aq_165: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B