SMTL ID : 2eib.1

Crystal Structure of Galactose Oxidase, W290H mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x CU: COPPER (II) ION(Non-covalent)

CU.1: 7 residues within 4Å: Chain A: F.227, C.228, Y.272, Y.495, H.496, H.581 Ligands: ACT.5 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:Y.272, A:Y.495, A:H.496, A:H.581, ACT.5

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 6 residues within 4Å: Chain A: K.29, D.32, N.34, T.37, A.141, E.142 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.32, A:N.34, A:T.37

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 1 residues within 4Å: Chain A: R.122 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.122

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.4: 8 residues within 4Å: Chain A: R.371, A.378, A.381, T.398, F.399, G.400, N.413, H.415 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.381 Hydrogen bonds: A:T.398 Water bridges: A:P.379 Salt bridges: A:R.371, A:H.415 ACT.5: 8 residues within 4Å: Chain A: F.194, F.227, Y.272, H.290, R.330, Y.495, H.496 Ligands: CU.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.194 Hydrogen bonds: A:R.330, A:Y.495 Salt bridges: A:H.290, A:H.496 ACT.6: 5 residues within 4Å: Chain A: F.194, G.195, G.196, S.197, N.245 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.196

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rogers, M.S. et al., The Stacking Tryptophan of Galactose Oxidase: A Second-Coordination Sphere Residue that Has Profound Effects on Tyrosyl Radical Behavior and Enzyme Catalysis. Biochemistry (2007)

Release Date

2007-04-24

Peptides

Galactose oxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Galactose oxidase