SMTL ID : 2ekl.1

Structure of ST1218 protein from Sulfolobus tokodaii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.77 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 22 residues within 4Å: Chain A: I.77, S.101, A.105, G.149, G.151, R.152, I.153, Y.171, D.172, I.173, L.174, H.203, V.204, T.205, I.213, T.231, S.232, R.233, D.257, H.283, G.285, A.286 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:I.77, A:A.105, A:I.153 Hydrogen bonds: A:R.152, A:I.153, A:I.173, A:V.204, A:T.205, A:T.231, A:D.257, A:G.285, A:A.286 Water bridges: A:G.151, A:R.152, A:R.152, A:G.154, A:V.204, A:T.205, A:R.233, A:Q.287 Salt bridges: A:R.152, A:R.152 NAD.2: 22 residues within 4Å: Chain B: I.77, S.101, A.105, G.149, G.151, R.152, I.153, Y.171, D.172, I.173, L.174, H.203, V.204, T.205, I.213, T.231, S.232, R.233, D.257, H.283, G.285, A.286 20 PLIP interactions: 20 interactions with chain B Hydrophobic interactions: B:I.77, B:A.105, B:I.153 Hydrogen bonds: B:R.152, B:I.153, B:I.173, B:V.204, B:T.205, B:T.231, B:G.285, B:A.286 Water bridges: B:G.151, B:R.152, B:R.152, B:G.154, B:V.204, B:R.233, B:Q.287 Salt bridges: B:R.152, B:R.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lokanath, N.K. et al., Structure of ST1218 protein from Sulfolobus tokodaii. To be Published

Release Date

2008-03-25

Peptides

D-3-phosphoglycerate dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

D-3-phosphoglycerate dehydrogenase