SMTL ID : 2ep7.1 (1 other biounit)

Structural study of Project ID aq_1065 from Aquifex aeolicus VF5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 23 residues within 4Å: Chain A: N.8, G.9, F.10, G.11, R.12, I.13, N.33, D.34, L.35, Q.77, K.78, A.96, T.97, G.98, F.100, T.120, A.121, C.152, T.182, N.183, N.322, E.323, Y.326 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:I.13, A:Y.326 Hydrogen bonds: A:F.10, A:R.12, A:I.13, A:N.33, A:K.78, A:G.98, A:T.120, A:N.183, A:N.322 Water bridges: A:N.8, A:N.8, A:G.11, A:G.14, A:G.98, A:T.120, A:N.183, A:N.183, A:N.183, A:E.323 NAD.2: 22 residues within 4Å: Chain B: G.9, F.10, G.11, R.12, I.13, N.33, D.34, L.35, Q.77, K.78, A.96, T.97, G.98, F.100, T.120, A.121, C.152, T.182, N.183, N.322, E.323, Y.326 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:I.13, B:Y.326 Hydrogen bonds: B:F.10, B:R.12, B:I.13, B:K.78, B:N.183, B:N.322 Water bridges: B:N.8, B:N.8, B:G.11, B:G.14, B:N.183, B:N.183, B:N.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Asada, Y. et al., Structural study of Project ID aq_1065 from Aquifex aeolicus VF5. To be Published

Release Date

2007-10-02

Peptides

Glyceraldehyde-3-phosphate dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glyceraldehyde-3-phosphate dehydrogenase

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