SMTL ID : 2erm.1

Solution structure of a biologically active human FGF-1 monomer, complexed to a hexasaccharide heparin-analogue

Coordinates

PDB Format

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x IDS- GNS- IDR- NGY- IDS- GNS: 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-acetamido-2-deoxy-6-O-sulfo-alpha-D-glucopyranose-(1-4)-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid

IDS-GNS-IDR-NGY-IDS-GNS.1: 13 residues within 4Å: Chain A: S.16, N.17, G.18, L.110, K.111, K.112, K.117, R.118, R.121, Q.126, K.127, A.128 Ligands: IPA.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.16, A:G.18, A:K.112, A:K.127, A:N.17, A:N.17, A:K.112, A:Q.126, A:K.127, A:A.128, A:N.17, A:N.17, A:K.112, A:Q.126 Salt bridges: A:K.112, A:K.127, A:K.111, A:K.117, A:R.121, A:K.112, A:K.112, A:K.127, A:K.111, A:K.117

1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.2: 5 residues within 4Å: Chain A: K.111, S.115, C.116, K.117 Ligands: IDS-GNS-IDR-NGY-IDS-GNS.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Canales, A. et al., Solution NMR structure of a human FGF-1 monomer, activated by a hexasaccharide heparin-analogue. Febs J. (2006)

Release Date

2006-10-03

Peptides

Heparin-binding growth factor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Heparin-binding growth factor 1

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