SMTL ID : 2esl.7 (11 other biounits)

Human Cyclophilin C in Complex with Cyclosporin A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-6-6-mer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: D.71 Chain B: D.71 Chain C: D.71 5 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B, 2 interactions with chain C Metal complexes: A:D.71, B:D.71, B:D.71, C:D.71, C:D.71 CA.6: 3 residues within 4Å: Chain D: D.71 Chain E: D.71 Chain F: D.71 5 PLIP interactions: 2 interactions with chain D, 1 interactions with chain F, 2 interactions with chain E Metal complexes: D:D.71, D:D.71, F:D.71, E:D.71, E:D.71 CA.10: 2 residues within 4Å: Chain F: E.46, E.55 2 PLIP interactions: 2 interactions with chain F Metal complexes: F:E.46, F:E.55

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 3 residues within 4Å: Chain A: H.152 Chain B: H.152 Chain C: H.152 4 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A, 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: B:H.152, A:H.152, C:H.152, H2O.1 ZN.7: 3 residues within 4Å: Chain D: H.152 Chain E: H.152 Chain F: H.152 4 PLIP interactions: 1 interactions with chain F, 1 interactions with chain E, 1 interactions with chain D, 1 Ligand-Water interactions Metal complexes: F:H.152, E:H.152, D:H.152, H2O.17

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 6 residues within 4Å: Chain A: I.145, D.146, G.147, M.148 Chain B: Q.157, A.158 10 PLIP interactions: 5 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:D.146, A:G.147, A:M.148, B:Q.157, B:A.158 Water bridges: A:I.145, A:T.149, B:Q.157, B:Q.157, B:T.167 SO4.4: 6 residues within 4Å: Chain B: D.146, G.147, M.148 Chain C: L.156, Q.157, A.158 7 PLIP interactions: 2 interactions with chain C, 5 interactions with chain B Hydrogen bonds: C:Q.157, C:A.158, B:D.146, B:G.147, B:M.148 Water bridges: B:T.149, B:T.149 SO4.5: 6 residues within 4Å: Chain A: L.156, Q.157, A.158 Chain C: D.146, G.147, M.148 6 PLIP interactions: 2 interactions with chain A, 4 interactions with chain C Hydrogen bonds: A:Q.157, A:A.158, C:D.146, C:G.147, C:M.148 Water bridges: C:T.149 SO4.8: 6 residues within 4Å: Chain D: D.146, G.147, M.148, T.149 Chain E: Q.157, A.158 6 PLIP interactions: 3 interactions with chain D, 3 interactions with chain E Hydrogen bonds: D:G.147, D:M.148, D:T.149, E:Q.157, E:A.158 Water bridges: E:T.167 SO4.9: 6 residues within 4Å: Chain E: D.146, G.147, M.148 Chain F: L.156, Q.157, A.158 8 PLIP interactions: 3 interactions with chain F, 5 interactions with chain E Hydrogen bonds: F:L.156, F:Q.157, F:A.158, E:D.146, E:G.147, E:M.148 Water bridges: E:T.149, E:T.149 SO4.11: 5 residues within 4Å: Chain D: Q.157, A.158 Chain F: D.146, G.147, M.148 9 PLIP interactions: 5 interactions with chain F, 4 interactions with chain D Hydrogen bonds: F:D.146, F:G.147, F:M.148, D:Q.157, D:Q.157, D:A.158 Water bridges: F:T.149, F:T.149, D:T.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Davis, T.L. et al., Structural and biochemical characterization of the human cyclophilin family of peptidyl-prolyl isomerases. PLoS Biol. (2010)

Release Date

2005-12-13

Peptides

Peptidyl-prolyl cis-trans isomerase C: ABCDEF
CYCLOSPORIN A: GHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
I

H
J

I
K

J
L

K
M

L
N

Peptidyl-prolyl cis-trans isomerase C

CYCLOSPORIN A

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