SMTL ID : 2ewp.2 (2 other biounits)

Crystal structure of Estrogen Related Receptor-3 (ERR-gamma) ligand binding domaind with tamoxifen analog GSK5182

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x TXF: (Z)-4-(1-{4-[2-(DIMETHYLAMINO)ETHOXY]PHENYL}-5-HYDROXY-2-PHENYLPENT-1-ENYL)PHENOL(Non-covalent)

TXF.1: 21 residues within 4Å: Chain A: L.33, L.36, C.37, A.40, D.41, E.43, W.73, M.74, L.77, V.81, R.84, Y.94, L.110, N.114, I.117, A.199, H.202, F.203, L.208, E.209, M.214 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:L.33, A:L.36, A:A.40, A:W.73, A:L.77, A:L.77, A:V.81, A:L.110, A:F.203, A:F.203, A:L.208 Hydrogen bonds: A:E.43, A:R.84, A:N.114, A:N.114 Water bridges: A:V.81 Salt bridges: A:D.41 pi-Stacking: A:Y.94 TXF.2: 22 residues within 4Å: Chain B: L.33, L.36, C.37, A.40, D.41, E.43, W.73, M.74, L.77, V.81, R.84, Y.94, L.110, L.113, N.114, I.117, A.199, H.202, F.203, I.206, L.208, E.209 20 PLIP interactions: 20 interactions with chain B Hydrophobic interactions: B:L.33, B:L.36, B:A.40, B:W.73, B:L.77, B:L.77, B:V.81, B:L.110, B:L.113, B:F.203, B:I.206, B:L.208 Hydrogen bonds: B:E.43, B:R.84, B:Y.94, B:N.114, B:N.114 Water bridges: B:V.81 Salt bridges: B:D.41 pi-Stacking: B:Y.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chao, E.Y. et al., Structure-guided synthesis of tamoxifen analogs with improved selectivity for the orphan ERRgamma. Bioorg.Med.Chem.Lett. (2006)

Release Date

2006-05-09

Peptides

Estrogen-related receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Estrogen-related receptor gamma

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