SMTL ID : 2ewt.1

Crystal structure of the DNA-binding domain of BldD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.81 Å

Oligo State

homo-dimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.45 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.45 Water bridges: A:R.45 SO4.2: 3 residues within 4Å: Chain A: Y.43, R.48, R.54 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.43 Water bridges: A:R.48, A:R.48, A:A.49 Salt bridges: A:R.48, A:R.54 SO4.3: 2 residues within 4Å: Chain A: S.2, S.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.3, A:S.3 SO4.4: 1 residues within 4Å: Chain B: R.45 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.45 Water bridges: B:R.45 SO4.5: 3 residues within 4Å: Chain B: Y.43, R.48, R.54 6 PLIP interactions: 6 interactions with chain B Water bridges: B:Y.43, B:R.48, B:R.48, B:A.49 Salt bridges: B:R.48, B:R.54 SO4.6: 2 residues within 4Å: Chain B: S.2, S.3 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.3, B:S.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, I.K. et al., Crystal structure of the DNA-binding domain of BldD, a central regulator of aerial mycelium formation in Streptomyces coelicolor A3(2). Mol.Microbiol. (2006)

Release Date

2006-06-13

Peptides

putative DNA-binding protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

putative DNA-binding protein

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