SMTL ID : 2exf.1

Solution structure of the HIV-1 nucleocapsid (NCp7(12-55)) complexed with the DNA (-) Primer Binding Site

Coordinates

PDB Format

Method

SOLUTION NMR

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain B: C.4, N.6, C.7, H.12, C.17 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.4, B:C.7, B:H.12, B:C.17 ZN.2: 6 residues within 4Å: Chain B: C.25, C.28, K.30, H.33, C.38, E.40 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.25, B:C.28, B:H.33, B:C.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bourbigot, S. et al., How the HIV-1 nucleocapsid protein binds and destabilises the (-)primer binding site during reverse transcription. J.Mol.Biol. (2008)

Release Date

2007-04-24

Peptides

Nucleocapsid protein* (NC*): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
A

Nucleocapsid protein* (NC*)

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