SMTL ID : 2eys.1 (1 other biounit)

A structural basis for selection and cross-species reactivity of the semi-invariant NKT cell receptor in CD1d/glycolipid recognition

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.21 Å

Oligo State

hetero-oligomer

Ligands

2 x ACY: ACETIC ACID(Non-functional Binders)

ACY.1: 5 residues within 4Å: Chain A: R.169 Chain B: E.164, V.165, H.166, S.167 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:H.166 Hydrogen bonds: B:H.166, B:S.167 Salt bridges: A:R.169 ACY.2: 3 residues within 4Å: Chain B: G.162, H.206, R.208 4 PLIP interactions: 4 interactions with chain B Water bridges: B:G.162, B:G.162 Salt bridges: B:H.206, B:R.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kjer-Nielsen, L. et al., A structural basis for selection and cross-species reactivity of the semi-invariant NKT cell receptor in CD1d/glycolipid recognition. J.Exp.Med. (2006)

Release Date

2006-03-21

Peptides

NKT15: A
NKT15: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

NKT15

NKT15

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