SMTL ID : 2f07.1

Crystal Structure of YvdT from Bacillus subtilis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x BTB: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

BTB.1: 10 residues within 4Å: Chain A: Y.109, W.121, E.122, Y.125, Y.129, N.160, E.163, E.167 Chain B: N.164, R.168 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Y.109, A:W.121, A:E.163, A:E.163, B:N.164 Salt bridges: A:E.163 BTB.2: 10 residues within 4Å: Chain A: N.164, R.168 Chain B: Y.109, W.121, E.122, Y.125, Y.129, N.160, E.163, E.167 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:Y.109, B:W.121, B:Y.125, B:Y.129, B:E.163, B:E.163 Salt bridges: B:E.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Su, X.-D. et al., Crystal Structure of YvdT from Bacillus subtilis. To be Published

Release Date

2006-11-21

Peptides

YvdT: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

YvdT