SMTL ID : 2f11.1

Crystal Structure of the Human Sialidase Neu2 in Complex with isobutyl ether mimetic Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.57 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: Q.16, A.19, H.20, Y.22 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:A.19, A:H.20, A:Y.22, A:Y.22, A:Y.22

1 x IEM: 2-methylpropyl 2-acetamido-2,4-dideoxy-alpha-L-threo-hex-4-enopyranosiduronic acid(Non-covalent)

IEM.2: 13 residues within 4Å: Chain A: R.23, I.24, R.43, M.87, N.88, Y.181, Y.183, L.219, E.220, R.239, Q.272, R.306, Y.336 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.24, A:Y.181, A:Y.183 Hydrogen bonds: A:R.43, A:Y.336 Water bridges: A:Y.361 Salt bridges: A:R.23, A:R.239, A:R.239, A:R.306

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chavas, L.M.G. et al., Crystal Structure of the Human Sialidase Neu2 in Complex with isobutyl ether mimetic Inhibitor. To be Published

Release Date

2006-11-21

Peptides

Sialidase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Sialidase 2

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