SMTL ID : 2f12.1

Crystal Structure of the Human Sialidase Neu2 in Complex with 3- hydroxypropyl ether mimetic Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.27 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: Q.16, G.18, A.19, H.20, Y.22 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:A.19, A:H.20, A:Y.22, A:Y.22, A:Y.22 Salt bridges: A:H.20

1 x HTM: 3-hydroxypropyl 2-acetamido-2,4-dideoxy-alpha-L-threo-hex-4-enopyranosiduronic acid(Non-covalent)

HTM.2: 13 residues within 4Å: Chain A: R.23, I.24, R.43, M.87, N.88, E.113, L.117, Y.183, L.219, E.220, R.239, R.306, Y.336 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.24, A:L.219 Hydrogen bonds: A:R.43, A:Y.336 Water bridges: A:N.88, A:N.88, A:N.88, A:Y.181 Salt bridges: A:R.23, A:R.239, A:R.239, A:R.306

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chavas, L.M.G. et al., Crystal Structure of the Human Sialidase Neu2 in Complex with 3- hydroxypropyl ether mimetic Inhibitor. To be Published

Release Date

2006-11-21

Peptides

Sialidase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Sialidase 2

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