SMTL ID : 2f1h.1

RECOMBINASE IN COMPLEX WITH AMP-PNP and Potassium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: T.112, D.151 Ligands: K.4, ANP.5 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:T.112 MG.2: 4 residues within 4Å: Chain A: Q.98, S.99, N.242, D.246 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:Q.98, A:D.246

2 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)

K.3: 1 residues within 4Å: Ligands: ANP.5 No protein-ligand interaction detected (PLIP) K.4: 3 residues within 4Å: Chain A: D.151 Ligands: MG.1, ANP.5 No protein-ligand interaction detected (PLIP)

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.5: 15 residues within 4Å: Chain A: F.107, G.108, S.109, G.110, K.111, T.112, Q.113, R.158, Q.161, I.315, T.316, E.317 Ligands: MG.1, K.3, K.4 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:G.108, A:S.109, A:G.110, A:K.111, A:K.111, A:K.111, A:K.111, A:T.112, A:Q.113, A:Q.113, A:R.158, A:Q.161, A:Q.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qian, X. et al., Asp302 determines potassium dependence of a RadA recombinase from Methanococcus voltae. J.Mol.Biol. (2006)

Release Date

2006-05-30

Peptides

DNA repair and recombination protein radA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA repair and recombination protein radA

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