SMTL ID : 2f1j.1

Recombinase in Complex with ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: T.112 Ligands: ADP.3 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.112, H2O.1, H2O.1, H2O.1, H2O.1 MG.2: 3 residues within 4Å: Chain A: Q.98, S.99, D.246 6 PLIP interactions: 2 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:Q.98, A:D.246, H2O.1, H2O.1, H2O.1, H2O.1

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.3: 15 residues within 4Å: Chain A: V.106, F.107, G.108, S.109, G.110, K.111, T.112, Q.113, R.158, Q.161, R.296, I.315, T.316, E.317 Ligands: MG.1 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:G.108, A:S.109, A:G.110, A:K.111, A:T.112, A:Q.113, A:Q.113, A:R.158, A:Q.161, A:Q.161, A:Q.257, A:R.296 Water bridges: A:T.112, A:T.112, A:T.112, A:T.112 Salt bridges: A:K.111

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qian, X. et al., Asp302 determines potassium dependence of a RadA recombinase from Methanococcus voltae. J.Mol.Biol. (2006)

Release Date

2006-05-30

Peptides

DNA repair and recombination protein radA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA repair and recombination protein radA

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