SMTL ID : 2f7b.2 (1 other biounit)

CatM effector binding domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-tetramer

Ligands

16 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: V.17, G.47, T.48, R.66, L.67, P.116, N.122, F.123 Ligand excluded by PLIP SO4.2: 6 residues within 4Å: Chain A: K.68, R.76, V.78, K.81, Y.186, P.188 Ligand excluded by PLIP SO4.3: 4 residues within 4Å: Chain A: H.93, P.94, N.95, Q.96 Ligand excluded by PLIP SO4.4: 5 residues within 4Å: Chain A: K.90, H.91 Chain D: K.90, H.91 Ligands: SO4.19 Ligand excluded by PLIP SO4.6: 8 residues within 4Å: Chain B: V.17, G.47, T.48, R.66, L.67, P.116, N.122, F.123 Ligand excluded by PLIP SO4.7: 6 residues within 4Å: Chain B: K.68, R.76, V.78, K.81, Y.186, P.188 Ligand excluded by PLIP SO4.8: 4 residues within 4Å: Chain B: H.93, P.94, N.95, Q.96 Ligand excluded by PLIP SO4.9: 5 residues within 4Å: Chain B: K.90, H.91 Chain C: K.90, H.91 Ligands: SO4.14 Ligand excluded by PLIP SO4.11: 8 residues within 4Å: Chain C: V.17, G.47, T.48, R.66, L.67, P.116, N.122, F.123 Ligand excluded by PLIP SO4.12: 6 residues within 4Å: Chain C: K.68, R.76, V.78, K.81, Y.186, P.188 Ligand excluded by PLIP SO4.13: 4 residues within 4Å: Chain C: H.93, P.94, N.95, Q.96 Ligand excluded by PLIP SO4.14: 5 residues within 4Å: Chain B: K.90, H.91 Chain C: K.90, H.91 Ligands: SO4.9 Ligand excluded by PLIP SO4.16: 8 residues within 4Å: Chain D: V.17, G.47, T.48, R.66, L.67, P.116, N.122, F.123 Ligand excluded by PLIP SO4.17: 6 residues within 4Å: Chain D: K.68, R.76, V.78, K.81, Y.186, P.188 Ligand excluded by PLIP SO4.18: 4 residues within 4Å: Chain D: H.93, P.94, N.95, Q.96 Ligand excluded by PLIP SO4.19: 5 residues within 4Å: Chain A: K.90, H.91 Chain D: K.90, H.91 Ligands: SO4.4 Ligand excluded by PLIP

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 5 residues within 4Å: Chain A: R.66, Y.115, P.116, E.146, I.147 Ligand excluded by PLIP CL.10: 5 residues within 4Å: Chain B: R.66, Y.115, P.116, E.146, I.147 Ligand excluded by PLIP CL.15: 5 residues within 4Å: Chain C: R.66, Y.115, P.116, E.146, I.147 Ligand excluded by PLIP CL.20: 5 residues within 4Å: Chain D: R.66, Y.115, P.116, E.146, I.147 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ezezika, O.C. et al., Distinct Effector-binding Sites Enable Synergistic Transcriptional Activation by BenM, a LysR-type Regulator. J.Mol.Biol. (2007)

Release Date

2006-10-31

Peptides

HTH-type transcriptional regulator catM: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

HTH-type transcriptional regulator catM

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