SMTL ID : 2f83.1

Crystal structure at 2.9 Angstroms resolution of human plasma coagulation factor XI zymogen

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.87 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG-NAG.1: 1 residues within 4Å: Chain A: N.126 No protein-ligand interaction detected (PLIP) NAG-NAG.6: 1 residues within 4Å: Chain B: N.126 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)(Post Translational Modification)

NAG.2: 1 residues within 4Å: Chain A: N.90 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.90 NAG.3: 3 residues within 4Å: Chain A: N.450, N.530, T.531 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.530 NAG.7: 1 residues within 4Å: Chain B: N.90 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.90 NAG.8: 3 residues within 4Å: Chain B: N.450, N.530, T.531 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.530, B:T.531

4 x PT: PLATINUM (II) ION(Non-functional Binders)

PT.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) PT.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) PT.9: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) PT.10: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Papagrigoriou, E. et al., Crystal structure of the factor XI zymogen reveals a pathway for transactivation. Nat.Struct.Mol.Biol. (2006)

Release Date

2006-05-16

Peptides

Coagulation factor XI: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Coagulation factor XI