SMTL ID : 2f9l.1

3D structure of inactive human Rab11b GTPase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: S.19 Ligands: GDP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:S.19, H2O.5, H2O.5, H2O.5, H2O.5

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 19 residues within 4Å: Chain A: D.13, S.14, G.15, V.16, G.17, K.18, S.19, N.20, F.30, N.31, L.32, N.118, K.119, D.121, L.122, S.148, A.149, L.150 Ligands: MG.1 22 PLIP interactions: 22 interactions with chain A Hydrogen bonds: A:D.13, A:G.15, A:V.16, A:G.17, A:K.18, A:S.19, A:N.20, A:N.20, A:N.31, A:N.118, A:K.119, A:K.119, A:A.149, A:L.150 Water bridges: A:K.18, A:K.18, A:S.19, A:S.19, A:T.61 Salt bridges: A:K.18, A:D.121 pi-Stacking: A:F.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scapin, S.M. et al., The crystal structure of the small GTPase Rab11b reveals critical differences relative to the Rab11a isoform. J.Struct.Biol. (2006)

Release Date

2006-04-04

Peptides

RAB11B, member RAS oncogene family: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RAB11B, member RAS oncogene family

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