SMTL ID : 2f9q.1 (1 other biounit)

Crystal Structure of Human Cytochrome P450 2D6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-tetramer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 26 residues within 4Å: Chain A: R.79, V.97, F.98, W.106, R.110, I.164, L.280, A.283, G.284, T.287, T.288, T.291, Q.342, M.352, H.354, L.377, P.413, F.414, S.415, R.419, C.421, L.422, G.423, L.426, A.427, E.430 21 PLIP interactions: 21 interactions with chain A, Hydrophobic interactions: A:F.98, A:I.164, A:L.280, A:A.283, A:T.287, A:M.352, A:L.377, A:F.414, A:F.414, A:L.422, A:L.422, A:L.426 Hydrogen bonds: A:F.98, A:S.415, A:S.415 Salt bridges: A:R.79, A:R.79, A:R.110, A:H.354, A:R.419 Metal complexes: A:C.421 HEM.4: 26 residues within 4Å: Chain B: R.79, V.97, F.98, W.106, R.110, I.164, L.280, A.283, G.284, T.287, T.288, T.291, Q.342, M.352, H.354, L.377, P.413, F.414, S.415, R.419, C.421, L.422, G.423, L.426, A.427, E.430 20 PLIP interactions: 20 interactions with chain B, Hydrophobic interactions: B:F.98, B:F.98, B:I.164, B:L.280, B:T.287, B:M.352, B:L.377, B:F.414, B:L.422, B:L.422, B:L.426 Hydrogen bonds: B:F.98, B:S.415, B:S.415 Salt bridges: B:R.79, B:R.79, B:R.110, B:H.354, B:R.419 Metal complexes: B:C.421 HEM.5: 26 residues within 4Å: Chain C: R.79, V.97, F.98, W.106, R.110, I.164, L.280, A.283, G.284, T.287, T.288, T.291, Q.342, M.352, H.354, L.377, P.413, F.414, S.415, R.419, C.421, L.422, G.423, L.426, A.427, E.430 19 PLIP interactions: 19 interactions with chain C, Hydrophobic interactions: C:F.98, C:I.164, C:L.280, C:A.283, C:T.287, C:L.377, C:F.414, C:L.422, C:L.422, C:L.426 Hydrogen bonds: C:F.98, C:S.415, C:S.415 Salt bridges: C:R.79, C:R.79, C:R.110, C:H.354, C:R.419 Metal complexes: C:C.421 HEM.6: 27 residues within 4Å: Chain D: R.79, V.97, F.98, W.106, R.110, I.164, L.280, A.283, G.284, T.287, T.288, T.291, Q.342, M.352, H.354, L.377, P.413, F.414, S.415, R.419, A.420, C.421, L.422, G.423, L.426, A.427, E.430 18 PLIP interactions: 18 interactions with chain D, Hydrophobic interactions: D:F.98, D:I.164, D:L.280, D:M.352, D:L.377, D:F.414, D:L.422, D:L.422, D:L.426 Hydrogen bonds: D:F.98, D:S.415, D:S.415 Salt bridges: D:R.79, D:R.79, D:R.110, D:H.354, D:R.419 Metal complexes: D:C.421

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain B: R.107, R.111 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.107, B:R.111 SO4.3: 3 residues within 4Å: Chain B: R.107, R.111, R.418 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.111, B:R.418

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rowland, P. et al., Crystal Structure of Human Cytochrome P450 2D6. J.Biol.Chem. (2006)

Release Date

2005-12-20

Peptides

Cytochrome P450 2D6: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Cytochrome P450 2D6

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