SMTL ID : 2fc0.1

WRN exonuclease, Mn dGMP complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: D.51, E.53, D.185 Ligands: MN.2 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.51, A:E.53, A:D.185, H2O.1, H2O.5, H2O.8 MN.2: 3 residues within 4Å: Chain A: D.51, M.52 Ligands: MN.1 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.51, H2O.6, H2O.8, H2O.8, H2O.8

1 x DGP: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE(Non-covalent)

DGP.3: 1 residues within 4Å: Chain A: W.114 6 PLIP interactions: 6 interactions with chain A Water bridges: A:E.110 pi-Stacking: A:W.114, A:W.114, A:W.114 pi-Cation interactions: A:W.114, A:W.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Perry, J.J. et al., WRN exonuclease structure and molecular mechanism imply an editing role in DNA end processing. Nat.Struct.Mol.Biol. (2006)

Release Date

2006-04-25

Peptides

Werner syndrome helicase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Werner syndrome helicase

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