SMTL ID : 2fcj.4 (3 other biounits)

Structure of small TOPRIM domain protein from Bacillus stearothermophilus.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: L.102, R.103 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.103 Water bridges: A:L.102 GOL.2: 4 residues within 4Å: Chain A: N.24, L.102, D.107, V.108 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.24, A:V.108

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain B: H.96, Q.99, R.103 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:H.96, B:R.103 SO4.4: 1 residues within 4Å: Chain B: R.109 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.109

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.5: 10 residues within 4Å: Chain B: E.11, G.12, D.15, G.34, D.58, D.60, E.61, A.62, R.87, E.88 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:E.61, B:A.62, B:R.87 Salt bridges: B:E.11, B:D.60, B:E.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rezacova, P. et al., Crystal structure and putative function of small Toprim domain-containing protein from Bacillus stearothermophilus. Proteins (2008)

Release Date

2006-01-24

Peptides

small TOPRIM domain protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

small TOPRIM domain protein

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