- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.45 Å
- Oligo State
- hetero-oligomer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 4 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
GTP.2: 22 residues within 4Å:- Chain B: L.15, C.16, D.17, S.18, G.19, K.20, T.21, L.22, Y.32, T.35, T.37, S.38, P.62, G.63, N.123, K.124, D.126, I.127, S.190, A.191, K.192
- Ligands: MG.1
29 PLIP interactions:29 interactions with chain B- Hydrogen bonds: B:D.17, B:S.18, B:G.19, B:K.20, B:T.21, B:T.21, B:L.22, B:Y.32, B:Y.32, B:T.35, B:S.38, B:G.63, B:N.123, B:K.124, B:K.124, B:A.191, B:K.192, B:K.192
- Water bridges: B:T.21, B:T.35, B:Q.36, B:S.38, B:S.38, B:S.38, B:H.64
- Salt bridges: B:K.20, B:K.20, B:D.126
- pi-Cation interactions: B:K.124
GTP.4: 22 residues within 4Å:- Chain D: L.15, C.16, D.17, S.18, G.19, K.20, T.21, L.22, Y.32, T.35, T.37, S.38, P.62, G.63, N.123, K.124, D.126, I.127, S.190, A.191, K.192
- Ligands: MG.3
29 PLIP interactions:29 interactions with chain D- Hydrogen bonds: D:D.17, D:S.18, D:G.19, D:K.20, D:T.21, D:T.21, D:L.22, D:Y.32, D:Y.32, D:T.35, D:S.38, D:G.63, D:N.123, D:K.124, D:K.124, D:A.191, D:K.192, D:K.192
- Water bridges: D:T.21, D:T.35, D:Q.36, D:S.38, D:S.38, D:S.38, D:H.64
- Salt bridges: D:K.20, D:K.20, D:D.126
- pi-Cation interactions: D:K.124
GTP.6: 22 residues within 4Å:- Chain F: L.15, C.16, D.17, S.18, G.19, K.20, T.21, L.22, Y.32, T.35, T.37, S.38, P.62, G.63, N.123, K.124, D.126, I.127, S.190, A.191, K.192
- Ligands: MG.5
26 PLIP interactions:26 interactions with chain F- Hydrogen bonds: F:D.17, F:S.18, F:G.19, F:K.20, F:T.21, F:L.22, F:Y.32, F:S.38, F:G.63, F:N.123, F:K.124, F:K.124, F:A.191, F:K.192, F:K.192
- Water bridges: F:T.21, F:T.21, F:T.35, F:S.38, F:S.38, F:S.38, F:H.64
- Salt bridges: F:K.20, F:K.20, F:D.126
- pi-Cation interactions: F:K.124
GTP.8: 22 residues within 4Å:- Chain H: L.15, C.16, D.17, S.18, G.19, K.20, T.21, L.22, Y.32, T.35, T.37, S.38, P.62, G.63, N.123, K.124, D.126, I.127, S.190, A.191, K.192
- Ligands: MG.7
26 PLIP interactions:26 interactions with chain H- Hydrogen bonds: H:D.17, H:S.18, H:G.19, H:K.20, H:T.21, H:L.22, H:Y.32, H:S.38, H:G.63, H:N.123, H:K.124, H:K.124, H:A.191, H:K.192, H:K.192
- Water bridges: H:T.21, H:T.21, H:T.35, H:S.38, H:S.38, H:S.38, H:H.64
- Salt bridges: H:K.20, H:K.20, H:D.126
- pi-Cation interactions: H:K.124
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Schlenker, O. et al., The structure of the mammalian signal recognition particle (SRP) receptor as prototype for the interaction of small GTPases with Longin domains. J.Biol.Chem. (2006)
- Release Date
- 2006-01-31
- Peptides
- Signal recognition particle receptor alpha subunit: ACEG
Signal recognition particle receptor beta subunit: BDFH - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AG
AB
BD
BF
BH
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.45 Å
- Oligo State
- hetero-oligomer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 4 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Schlenker, O. et al., The structure of the mammalian signal recognition particle (SRP) receptor as prototype for the interaction of small GTPases with Longin domains. J.Biol.Chem. (2006)
- Release Date
- 2006-01-31
- Peptides
- Signal recognition particle receptor alpha subunit: ACEG
Signal recognition particle receptor beta subunit: BDFH - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AG
AB
BD
BF
BH
B