SMTL ID : 2fm1.1

Crystal structure of L-ALLO-threonine aldolase (tm1744) from Thermotoga maritima at 2.25 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-tetramer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: N.300, K.302, S.355 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:N.300, A:S.355, H2O.7 CA.2: 1 residues within 4Å: Chain A: D.334 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.334, H2O.5

10 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: Q.83, R.84 Chain C: Q.83, R.84 Ligand excluded by PLIP CL.4: 5 residues within 4Å: Chain A: A.35, E.36, V.37 Chain D: K.23, R.29 Ligand excluded by PLIP CL.5: 5 residues within 4Å: Chain A: K.23, R.29 Chain D: A.35, E.36, V.37 Ligand excluded by PLIP CL.6: 5 residues within 4Å: Chain B: A.35, E.36, V.37 Chain C: K.23, R.29 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain B: R.156, V.157, K.290 Ligand excluded by PLIP CL.8: 4 residues within 4Å: Chain B: K.23, R.29 Chain C: E.36, V.37 Ligand excluded by PLIP CL.9: 4 residues within 4Å: Chain A: K.233 Chain C: R.134, N.135, I.136 Ligand excluded by PLIP CL.10: 3 residues within 4Å: Chain C: R.156, V.157, K.290 Ligand excluded by PLIP CL.13: 4 residues within 4Å: Chain B: Q.83, R.84 Chain D: Q.83, R.84 Ligand excluded by PLIP CL.14: 3 residues within 4Å: Chain D: R.156, V.157, K.290 Ligand excluded by PLIP

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.11: 4 residues within 4Å: Chain C: K.61, G.200, A.202, D.203 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:D.203, C:D.203 Water bridges: C:V.177, C:A.202, C:D.224

1 x NA: SODIUM ION(Non-functional Binders)

NA.12: 3 residues within 4Å: Chain D: T.298, L.301, V.303 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:T.298, D:L.301

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of L-ALLO-threonine aldolase (tm1744) from Thermotoga maritima at 2.25 A resolution. To be published

Release Date

2006-01-31

Peptides

L-allo-threonine aldolase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

L-allo-threonine aldolase