SMTL ID : 2fo0.1

Organization of the SH3-SH2 Unit in Active and Inactive Forms of the c-Abl Tyrosine Kinase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.27 Å

Oligo State

monomer

Ligands

1 x MYR: MYRISTIC ACID(Non-covalent)

MYR.1: 5 residues within 4Å: Chain A: L.317, L.318, E.439, G.440, I.479 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.317, A:L.317, A:I.479

1 x P16: 6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE(Non-covalent)

P16.2: 19 residues within 4Å: Chain A: L.225, Y.230, V.233, A.246, V.247, K.248, E.263, M.267, V.276, I.290, T.292, E.293, F.294, M.295, G.298, L.347, A.357, D.358, F.359 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.225, A:A.246, A:K.248, A:V.276, A:I.290, A:T.292, A:F.294, A:L.347, A:F.359 Hydrogen bonds: A:M.295, A:M.295 pi-Cation interactions: A:K.248

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: Y.297, Y.303, G.349, E.350, N.351, H.352 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.303, A:E.350, A:N.351, A:H.352 GOL.4: 3 residues within 4Å: Chain A: T.155, A.156, S.157 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.156 Water bridges: A:T.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nagar, B. et al., Organization of the SH3-SH2 unit in active and inactive forms of the c-Abl tyrosine kinase. Mol.Cell (2006)

Release Date

2006-03-21

Peptides

Proto-oncogene tyrosine-protein kinase ABL1 (1B ISOFORM): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Proto-oncogene tyrosine-protein kinase ABL1 (1B ISOFORM)