SMTL ID : 2fs6.1 (1 other biounit)

Crystal Structure of Apo-Cellular Retinoic Acid Binding Protein Type II At 1.35 Angstroms Resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

5 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 3 residues within 4Å: Chain A: V.76, D.77, G.78 No protein-ligand interaction detected (PLIP) ACT.2: 3 residues within 4Å: Chain A: I.31, V.58, R.59 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.31, A:V.58 Salt bridges: A:R.59 ACT.3: 5 residues within 4Å: Chain A: P.39, T.54, L.121, R.132, Y.134 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:T.54 Hydrogen bonds: A:Y.134 Salt bridges: A:R.132 ACT.4: 7 residues within 4Å: Chain A: E.73, Q.74, T.75, V.76, Q.97, W.109, M.123 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.75, A:Q.97 Water bridges: A:V.76, A:R.111, A:R.111 ACT.5: 2 residues within 4Å: Chain A: K.92, E.112 2 PLIP interactions: 2 interactions with chain A Water bridges: A:K.92 Salt bridges: A:K.92

1 x NA: SODIUM ION(Non-functional Binders)

NA.6: 3 residues within 4Å: Chain A: V.21, D.127, V.128 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.127

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vaezeslami, S. et al., The structure of Apo-wild-type cellular retinoic acid binding protein II at 1.4 A and its relationship to ligand binding and nuclear translocation. J.Mol.Biol. (2006)

Release Date

2006-09-19

Peptides

Cellular retinoic acid-binding protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cellular retinoic acid-binding protein 2

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