SMTL ID : 2ft3.1 (2 other biounits)

Crystal structure of the biglycan dimer core protein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

homo-dimer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: K.252, N.275 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.252, A:N.275 NAG.3: 2 residues within 4Å: Chain B: K.252, N.275 No protein-ligand interaction detected (PLIP)

2 x FLC: CITRATE ANION(Non-covalent)

FLC.2: 5 residues within 4Å: Chain A: H.202, G.225, H.226, H.247, D.249 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.225 Salt bridges: A:H.202, A:H.226, A:H.226, A:H.247, A:H.247 FLC.4: 7 residues within 4Å: Chain A: L.43, L.45 Chain B: H.202, G.225, H.226, H.247, D.249 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.225, B:H.247 Salt bridges: B:H.202, B:H.226, B:H.226

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scott, P.G. et al., Crystal Structure of the Biglycan Dimer and Evidence That Dimerization Is Essential for Folding and Stability of Class I Small Leucine-rich Repeat Proteoglycans. J.Biol.Chem. (2006)

Release Date

2006-03-28

Peptides

Biglycan: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Biglycan

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