SMTL ID : 2ftd.2 (1 other biounit)

Crystal structure of Cathepsin K complexed with 7-Methyl-Substituted Azepan-3-one compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

1 x ILI: N-[(1S)-1-({[(3S,4S,7R)-3-HYDROXY-7-METHYL-1-(PYRIDIN-2-YLSULFONYL)-2,3,4,7-TETRAHYDRO-1H-AZEPIN-4-YL]AMINO}CARBONYL)-3-METHYLBUTYL]-1-BENZOFURAN-2-CARBOXAMIDE(Covalent)

ILI.1: 19 residues within 4Å: Chain A: Q.19, Q.21, C.22, G.23, S.24, C.25, W.26, E.59, D.61, G.65, G.66, Y.67, M.68, A.134, L.160, N.161, H.162, A.163, W.184 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:D.61, A:Y.67, A:A.134, A:N.161, A:A.163 Hydrogen bonds: A:Q.19, A:C.25, A:G.66, A:G.66, A:N.161 pi-Stacking: A:Y.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamashita, D.S. et al., Structure activity relationships of 5-, 6-, and 7-methyl-substituted azepan-3-one cathepsin K inhibitors. J.Med.Chem. (2006)

Release Date

2007-01-30

Peptides

Cathepsin K: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Cathepsin K

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