SMTL ID : 2fua.1

L-FUCULOSE 1-PHOSPHATE ALDOLASE CRYSTAL FORM T WITH COBALT

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

4 x CO: COBALT (II) ION(Non-covalent)

CO.1: 5 residues within 4Å: Chain A: E.73, H.92, H.94, H.155 Chain C: Y.113 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.73, A:E.73, A:H.92, A:H.94, A:H.155 CO.5: 5 residues within 4Å: Chain B: E.73, H.92, H.94, H.155 Chain D: Y.113 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.73, B:E.73, B:H.92, B:H.94, B:H.155 CO.9: 5 residues within 4Å: Chain B: Y.113 Chain C: E.73, H.92, H.94, H.155 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:E.73, C:E.73, C:H.92, C:H.94, C:H.155 CO.13: 5 residues within 4Å: Chain A: Y.113 Chain D: E.73, H.92, H.94, H.155 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:E.73, D:E.73, D:H.92, D:H.94, D:H.155

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: G.28, N.29, T.43, S.71, S.72 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.29, A:T.43, A:T.43, A:S.72 Water bridges: A:A.27, A:G.44, A:S.72, A:E.73 SO4.3: 3 residues within 4Å: Chain A: W.74, R.75 Chain C: Y.209 5 PLIP interactions: 1 interactions with chain C, 4 interactions with chain A Hydrogen bonds: C:Y.209, A:W.74 Water bridges: A:R.75, A:R.75 Salt bridges: A:R.75 SO4.6: 5 residues within 4Å: Chain B: G.28, N.29, T.43, S.71, S.72 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:N.29, B:T.43, B:T.43, B:S.72 Water bridges: B:A.27, B:G.44, B:S.72, B:E.73 SO4.7: 3 residues within 4Å: Chain B: W.74, R.75 Chain D: Y.209 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain D Hydrogen bonds: B:W.74, D:Y.209 Water bridges: B:R.75, B:R.75 Salt bridges: B:R.75 SO4.10: 5 residues within 4Å: Chain C: G.28, N.29, T.43, S.71, S.72 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:N.29, C:T.43, C:T.43, C:S.72 Water bridges: C:A.27, C:G.44, C:S.72, C:E.73 SO4.11: 3 residues within 4Å: Chain B: Y.209 Chain C: W.74, R.75 5 PLIP interactions: 4 interactions with chain C, 1 interactions with chain B Hydrogen bonds: C:W.74, B:Y.209 Water bridges: C:R.75, C:R.75 Salt bridges: C:R.75 SO4.14: 5 residues within 4Å: Chain D: G.28, N.29, T.43, S.71, S.72 8 PLIP interactions: 8 interactions with chain D Hydrogen bonds: D:N.29, D:T.43, D:T.43, D:S.72 Water bridges: D:A.27, D:G.44, D:S.72, D:E.73 SO4.15: 3 residues within 4Å: Chain A: Y.209 Chain D: W.74, R.75 5 PLIP interactions: 4 interactions with chain D, 1 interactions with chain A Hydrogen bonds: D:W.74, A:Y.209 Water bridges: D:R.75, D:R.75 Salt bridges: D:R.75

4 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.4: 6 residues within 4Å: Chain A: C.14, M.17, G.28, V.30, T.41, I.45 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.45, A:Y.47 Water bridges: A:T.41 BME.8: 6 residues within 4Å: Chain B: C.14, M.17, G.28, V.30, T.41, I.45 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:I.45, B:Y.47 Water bridges: B:T.41 BME.12: 6 residues within 4Å: Chain C: C.14, M.17, G.28, V.30, T.41, I.45 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:I.45, C:Y.47 Water bridges: C:T.41 BME.16: 6 residues within 4Å: Chain D: C.14, M.17, G.28, V.30, T.41, I.45 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:I.45, D:Y.47 Water bridges: D:T.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dreyer, M.K. et al., Refined high-resolution structure of the metal-ion dependent L-fuculose-1-phosphate aldolase (class II) from Escherichia coli. Acta Crystallogr.,Sect.D (1996)

Release Date

1996-10-14

Peptides

L-FUCULOSE-1-PHOSPHATE ALDOLASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

L-FUCULOSE-1-PHOSPHATE ALDOLASE

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