- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.20 Å
- Oligo State
- hetero-2-2-2-mer
- Ligands
- 6 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)(Covalent)
- 2 x SMA: STIGMATELLIN A(Non-covalent)
SMA.3: 19 residues within 4Å:- Chain A: M.140, F.144, M.145, M.154, G.158, V.161, I.162, F.166, F.194, V.293, P.294, E.295, F.298, Y.302, M.336, F.337, I.340
- Chain F: C.151, H.152
13 PLIP interactions:13 interactions with chain A- Hydrophobic interactions: A:F.144, A:F.144, A:F.144, A:V.161, A:I.162, A:I.162, A:I.162, A:F.166, A:F.194, A:P.294, A:F.298, A:Y.302
- Hydrogen bonds: A:E.295
SMA.9: 22 residues within 4Å:- Chain C: C.151, H.152
- Chain D: M.140, F.144, M.145, M.154, G.158, V.161, I.162, F.166, L.180, L.197, I.292, V.293, P.294, E.295, F.298, F.301, Y.302, M.336, F.337, I.340
13 PLIP interactions:13 interactions with chain D- Hydrophobic interactions: D:M.140, D:F.144, D:V.161, D:I.162, D:I.162, D:F.166, D:L.180, D:L.197, D:F.298, D:F.298, D:F.301, D:Y.302
- Hydrogen bonds: D:E.295
- 2 x LOP: (1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE(Non-covalent)
LOP.4: 11 residues within 4Å:- Chain A: N.42, M.44, I.106, L.110, F.113, R.114, Y.117, Y.118, R.358, F.367, F.374
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:I.106, A:L.110, A:L.110, A:F.113, A:F.113, A:F.374
- Hydrogen bonds: A:Y.117, A:Y.118, A:Y.118
- Salt bridges: A:R.358
LOP.10: 14 residues within 4Å:- Chain D: M.44, S.102, L.103, I.106, F.113, R.114, Y.117, Y.118, F.263, L.274, R.358, F.367, W.368, F.374
12 PLIP interactions:12 interactions with chain D- Hydrophobic interactions: D:L.103, D:L.103, D:F.113, D:F.113, D:F.113, D:F.263, D:L.274, D:F.367, D:F.374
- Hydrogen bonds: D:Y.118, D:Y.118
- Salt bridges: D:R.358
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
FES.6: 9 residues within 4Å:- Chain C: C.129, H.131, L.132, G.133, C.134, C.149, H.152, G.153, S.154
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.129, C:H.131, C:C.149, C:H.152
FES.12: 10 residues within 4Å:- Chain F: C.129, H.131, L.132, G.133, C.134, C.149, C.151, H.152, G.153, S.154
4 PLIP interactions:4 interactions with chain F,- Metal complexes: F:C.129, F:H.131, F:C.149, F:H.152
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Esser, L. et al., Surface-modulated motion switch: Capture and release of iron-sulfur protein in the cytochrome bc1 complex. Proc.Natl.Acad.Sci.Usa (2006)
- Release Date
- 2006-08-29
- Peptides
- Cytochrome b: AD
Cytochrome c1: BE
Ubiquinol-cytochrome c reductase iron-sulfur subunit: CF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
MD
PB
NE
QC
OF
R - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.20 Å
- Oligo State
- hetero-2-2-2-mer
- Ligands
- 6 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)(Covalent)
- 2 x SMA: STIGMATELLIN A(Non-covalent)
- 2 x LOP: (1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE(Non-covalent)
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Esser, L. et al., Surface-modulated motion switch: Capture and release of iron-sulfur protein in the cytochrome bc1 complex. Proc.Natl.Acad.Sci.Usa (2006)
- Release Date
- 2006-08-29
- Peptides
- Cytochrome b: AD
Cytochrome c1: BE
Ubiquinol-cytochrome c reductase iron-sulfur subunit: CF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
MD
PB
NE
QC
OF
R - Membrane
-
We predict this structure to be a membrane protein.