SMTL ID : 2g0b.9 (12 other biounits)

The structure of FeeM, an N-acyl amino acid synthase from uncultured soil microbes

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-tetramer

Ligands

4 x NLT: N-DODECANOYL-L-TYROSINE(Non-covalent)

NLT.1: 22 residues within 4Å: Chain A: Y.29, Y.34, I.64, V.97, V.98, Q.99, F.100, F.124, L.128, I.141, S.142, I.143, N.144, Y.151, F.156, Y.165, V.168, A.170, P.171, A.172, L.177 Chain B: F.118 21 PLIP interactions: 20 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:I.64, A:F.100, A:F.124, A:F.124, A:L.128, A:I.141, A:Y.151, A:F.156, A:Y.165, A:Y.165, A:V.168, A:A.172, A:L.177, B:F.118 Hydrogen bonds: A:Y.29, A:Y.34, A:Q.99, A:F.100, A:S.142, A:N.144 pi-Stacking: A:Y.34 NLT.2: 22 residues within 4Å: Chain B: Y.29, Y.34, F.40, V.97, V.98, Q.99, F.100, F.124, V.127, L.128, I.141, S.142, I.143, N.144, Y.151, L.154, F.156, Y.165, V.168, A.170, P.171, A.172 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:F.100, B:F.124, B:V.127, B:L.128, B:I.141, B:I.143, B:L.154, B:Y.165, B:V.168, B:A.172 Hydrogen bonds: B:Y.29, B:Y.34, B:Q.99, B:F.100, B:S.142, B:N.144 pi-Stacking: B:Y.34 NLT.3: 22 residues within 4Å: Chain C: Y.29, Y.34, I.64, V.97, V.98, Q.99, F.100, F.124, L.128, I.141, S.142, I.143, N.144, Y.151, F.156, Y.165, V.168, A.170, P.171, A.172, L.177 Chain D: F.118 21 PLIP interactions: 20 interactions with chain C, 1 interactions with chain D Hydrophobic interactions: C:I.64, C:F.100, C:F.124, C:F.124, C:L.128, C:I.141, C:Y.151, C:F.156, C:Y.165, C:Y.165, C:V.168, C:A.172, C:L.177, D:F.118 Hydrogen bonds: C:Y.29, C:Y.34, C:Q.99, C:F.100, C:S.142, C:N.144 pi-Stacking: C:Y.34 NLT.4: 22 residues within 4Å: Chain D: Y.29, Y.34, F.40, V.97, V.98, Q.99, F.100, F.124, V.127, L.128, I.141, S.142, I.143, N.144, Y.151, L.154, F.156, Y.165, V.168, A.170, P.171, A.172 16 PLIP interactions: 16 interactions with chain D Hydrophobic interactions: D:F.100, D:F.124, D:V.127, D:L.128, D:I.141, D:I.143, D:L.154, D:Y.165, D:V.168, D:A.172 Hydrogen bonds: D:Y.34, D:Q.99, D:F.100, D:S.142, D:N.144 pi-Stacking: D:Y.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Van Wagoner, R.M. et al., FeeM, an N-Acyl Amino Acid Synthase from an Uncultured Soil Microbe: Structure, Mechanism, and Acyl Carrier Protein Binding. Structure (2006)

Release Date

2006-09-26

Peptides

FeeM: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

FeeM

Related Entries With Identical Sequence