SMTL ID : 2gdj.1

Delta-62 RADA recombinase in complex with AMP-PNP and magnesium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: T.54 Ligands: ANP.3 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:T.54 MG.2: 3 residues within 4Å: Chain A: Q.40, N.184, D.188 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:Q.40, A:D.188

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.3: 16 residues within 4Å: Chain A: V.48, F.49, G.50, S.51, G.52, K.53, T.54, Q.55, R.100, Q.103, Q.199, R.238, I.257, T.258, E.259 Ligands: MG.1 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:G.50, A:S.51, A:G.52, A:K.53, A:K.53, A:K.53, A:T.54, A:Q.55, A:Q.55, A:R.100, A:Q.103, A:R.238

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Galkin, V.E. et al., The Rad51/RadA N-Terminal Domain Activates Nucleoprotein Filament ATPase Activity. Structure (2006)

Release Date

2006-05-16

Peptides

DNA repair and recombination protein radA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA repair and recombination protein radA