SMTL ID : 2gdu.1

E232Q mutant of sucrose phosphorylase from BIFIDOBACTERIUM ADOLESCENTIS in complex with sucrose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x GLC- FRU: beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose(Non-covalent)

GLC-FRU.1: 17 residues within 4Å: Chain A: D.50, F.53, H.88, F.156, Q.160, R.190, D.192, A.193, Y.196, Q.232, H.234, H.289, D.290, L.341, D.342, Q.345, R.399 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:A.193, A:Q.232, A:H.234, A:D.290, A:D.342, A:Q.345, A:R.399, A:D.50, A:D.50, A:H.88, A:Q.160, A:R.190, A:D.192, A:Q.232, A:D.290, A:R.399, A:R.399 Water bridges: A:A.193, A:Q.232, A:D.342, A:D.342, A:D.342, A:D.290, A:R.403, A:R.403 GLC-FRU.2: 17 residues within 4Å: Chain B: D.50, F.53, H.88, F.156, Q.160, R.190, D.192, A.193, Y.196, Q.232, H.234, H.289, D.290, L.341, D.342, Q.345, R.399 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:A.193, B:Q.232, B:H.234, B:Q.345, B:D.50, B:H.88, B:Q.160, B:R.190, B:Q.232, B:Q.232, B:D.290, B:R.399, B:R.399, B:R.403 Water bridges: B:A.193, B:Y.196, B:Q.232, B:G.291, B:N.340, B:D.342

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mirza, O. et al., Structural Rearrangements of Sucrose Phosphorylase from Bifidobacterium adolescentis during Sucrose Conversion. J.Biol.Chem. (2006)

Release Date

2006-09-26

Peptides

sucrose phosphorylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

sucrose phosphorylase