SMTL ID : 2geq.1

Crystal Structure of a p53 Core Dimer Bound to DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain C: C.82, H.85, C.144, C.148 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.82, C:H.85, C:C.144, C:C.148 ZN.3: 4 residues within 4Å: Chain D: C.82, H.85, C.144, C.148 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.82, D:H.85, D:C.144, D:C.148

2 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.2: 6 residues within 4Å: Chain C: T.8, L.17, Y.32, N.37, D.174, S.175 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:L.17, C:L.17, C:Y.32 Water bridges: C:Q.10, C:N.37, C:S.175, C:S.175 TRS.4: 6 residues within 4Å: Chain D: T.8, H.16, L.17, N.37, D.174, S.175 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:T.8, D:L.17, D:D.174, D:S.175

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ho, W.C. et al., Structure of the p53 Core Domain Dimer Bound to DNA. J.Biol.Chem. (2006)

Release Date

2006-05-23

Peptides

Cellular tumor antigen p53: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

D
B

Cellular tumor antigen p53

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