SMTL ID : 2gew.1

Atomic resolution structure of cholesterol oxidase @ pH 9.0 (Streptomyces sp. SA-COO)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.97 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: H.326, W.328, N.419 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.329 Salt bridges: A:K.178, A:H.326

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.2: 45 residues within 4Å: Chain A: I.11, G.12, T.13, G.14, Y.15, G.16, A.17, L.34, E.35, M.36, G.37, L.91, Y.102, V.103, G.104, R.105, G.106, G.109, G.110, S.111, V.113, N.114, G.115, G.116, M.117, I.213, H.243, Q.244, V.245, G.283, A.284, G.285, S.286, G.288, L.292, Y.441, H.442, P.443, D.469, G.470, N.480, P.481, F.482, V.483, I.485 35 PLIP interactions: 35 interactions with chain A Hydrophobic interactions: A:Y.102, A:V.113, A:I.213, A:Y.441, A:Y.441 Hydrogen bonds: A:G.12, A:T.13, A:T.13, A:G.14, A:Y.15, A:G.16, A:E.35, A:M.36, A:G.104, A:R.105, A:G.106, A:G.109, A:G.110, A:N.114, A:G.115, A:M.117, A:M.117, A:V.245, A:V.245, A:G.470, A:N.480, A:F.482 Water bridges: A:G.104, A:Q.244, A:Q.244, A:Q.244, A:Q.244, A:S.286, A:S.286, A:V.483

1 x OXY: OXYGEN MOLECULE(Non-covalent)

OXY.3: 6 residues within 4Å: Chain A: M.117, F.354, A.355, E.356, I.374, N.480 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:E.356, A:N.480 Water bridges: A:A.355, A:E.356, A:E.356, A:N.480, A:N.480

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lyubimov, A.Y. et al., Atomic resolution crystallography reveals how changes in pH shape the protein microenvironment. Nat.Chem.Biol. (2006)

Release Date

2006-05-02

Peptides

Cholesterol oxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cholesterol oxidase

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