SMTL ID : 2gfh.2 (1 other biounit)

Crystal structure of a n-acetylneuraminic acid phosphatase (nanp) from mus musculus at 1.90 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 5 residues within 4Å: Chain A: D.24, D.26, D.201, T.202 Ligands: PO4.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.202 NA.5: 5 residues within 4Å: Chain B: D.24, D.26, D.201, T.202 Ligands: PO4.7 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.24, B:D.201, B:T.202

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: R.84, R.116, K.153 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain B: R.84, R.116, K.153 Ligand excluded by PLIP

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 8 residues within 4Å: Chain A: D.24, L.25, D.26, T.143, N.144, Q.150, K.176 Ligands: NA.1 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:L.25, A:D.26, A:D.26, A:T.143, A:T.143, A:N.144, A:Q.150 Water bridges: A:D.26, A:K.176, A:D.201, A:T.202, A:T.205, A:D.206 Salt bridges: A:K.176 PO4.7: 8 residues within 4Å: Chain B: D.24, L.25, D.26, T.143, N.144, Q.150, K.176 Ligands: NA.5 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:L.25, B:D.26, B:T.143, B:N.144, B:Q.150 Water bridges: B:D.24, B:D.26, B:N.144, B:K.176, B:D.201, B:T.202 Salt bridges: B:K.176

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 5 residues within 4Å: Chain A: N.27, T.28, L.29, I.30, D.31 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.29 Water bridges: A:D.31, A:D.31 EDO.8: 5 residues within 4Å: Chain B: N.27, T.28, L.29, I.30, D.31 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:L.29 Water bridges: B:D.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of Protein C20orf147 homolog (17391249) from Mus musculus at 1.90 A resolution. To be published

Release Date

2006-04-18

Peptides

haloacid dehalogenase-like hydrolase domain containing 4: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

haloacid dehalogenase-like hydrolase domain containing 4

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