SMTL ID : 2giq.1 (1 other biounit)

Hepatitis C virus RNA-dependent RNA polymerase NS5B with NNI-2 inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x NN2: 1-(2-CYCLOPROPYLETHYL)-3-(1,1-DIOXIDO-2H-1,2,4-BENZOTHIADIAZIN-3-YL)-6-FLUORO-4-HYDROXYQUINOLIN-2(1H)-ONE(Non-covalent)

NN2.1: 15 residues within 4Å: Chain A: F.199, R.206, N.322, D.324, C.372, S.374, L.390, G.416, N.417, M.420, Y.421, Q.452, Y.454, G.455, S.562 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.390, A:M.420, A:Y.421, A:Y.454 Hydrogen bonds: A:Q.452, A:Y.454 Water bridges: A:G.455, A:G.455, A:S.562 pi-Stacking: A:F.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Le Pogam, S. et al., Selection and characterization of replicon variants dually resistant to thumb- and palm-binding nonnucleoside polymerase inhibitors of the hepatitis C virus. J.Virol. (2006)

Release Date

2007-04-03

Peptides

RNA-directed RNA polymerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA-directed RNA polymerase

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