SMTL ID : 2gmj.1 (1 other biounit)

Structure of Porcine Electron Transfer Flavoprotein-Ubiquinone Oxidoreductase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 12 residues within 4Å: Chain A: L.504, C.528, P.529, V.532, Y.533, C.553, V.554, C.556, K.557, T.558, C.559, W.570 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.528, A:C.553, A:C.556, A:C.559

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.2: 33 residues within 4Å: Chain A: V.41, G.42, G.44, P.45, A.46, V.70, E.71, K.72, H.79, L.81, S.82, G.83, A.84, C.85, L.143, A.166, A.167, A.212, E.213, G.214, C.215, H.218, G.241, F.275, Y.277, R.331, L.333, G.353, C.354, I.364, K.365, G.366, T.367 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:F.275, A:R.331, A:L.333 Hydrogen bonds: A:A.43, A:A.46, A:K.72, A:H.79, A:S.82, A:S.82, A:G.83, A:A.84, A:C.85, A:C.85, A:A.167, A:A.167, A:G.214, A:C.215, A:H.218, A:Y.277, A:R.331, A:C.354, A:G.366, A:T.367 Water bridges: A:E.71, A:R.331, A:S.355, A:H.368, A:K.557 pi-Cation interactions: A:K.72

4 x TBU: TERTIARY-BUTYL ALCOHOL(Non-functional Binders)

TBU.3: 6 residues within 4Å: Chain A: T.261, Y.271, G.272, G.273, S.274, I.364 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.364 Hydrogen bonds: A:P.362 TBU.4: 5 residues within 4Å: Chain A: Y.271, I.421, G.434, T.438 Ligands: TBU.5 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:I.421 TBU.5: 3 residues within 4Å: Chain A: L.131, T.438 Ligands: TBU.4 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.131 TBU.6: 3 residues within 4Å: Chain A: K.324, R.325, I.326 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.324, A:K.324

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, J. et al., Structure of electron transfer flavoprotein-ubiquinone oxidoreductase and electron transfer to the mitochondrial ubiquinone pool. Proc.Natl.Acad.Sci.Usa (2006)

Release Date

2006-10-17

Peptides

Electron transfer flavoprotein-ubiquinone oxidoreductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Electron transfer flavoprotein-ubiquinone oxidoreductase

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