- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.1: 18 residues within 4Å:- Chain A: A.50, M.53, F.54, H.73, V.77, M.80, R.103, L.104, T.107, H.108, Y.111, V.113, H.117, F.118, V.121, Y.150, L.153, V.154
21 PLIP interactions:21 interactions with chain A,- Hydrophobic interactions: A:A.50, A:M.53, A:F.54, A:V.77, A:M.80, A:L.104, A:Y.111, A:Y.111, A:V.113, A:H.117, A:F.118, A:F.118, A:V.121, A:Y.150, A:V.154
- Water bridges: A:R.103
- Salt bridges: A:K.69, A:R.103
- pi-Stacking: A:H.73
- Metal complexes: A:H.73, A:H.108
HEM.4: 19 residues within 4Å:- Chain B: A.50, M.53, F.54, K.69, H.73, V.77, M.80, R.103, L.104, T.107, H.108, Y.111, V.113, H.117, F.118, V.121, Y.150, L.153, V.154
26 PLIP interactions:26 interactions with chain B,- Hydrophobic interactions: B:A.50, B:M.53, B:F.54, B:V.77, B:M.80, B:L.104, B:Y.111, B:Y.111, B:V.113, B:V.113, B:H.117, B:F.118, B:F.118, B:V.121, B:Y.150, B:V.154
- Hydrogen bonds: B:T.107
- Water bridges: B:K.69, B:K.69
- Salt bridges: B:K.69, B:R.103
- pi-Stacking: B:H.73, B:H.73, B:H.108
- Metal complexes: B:H.73, B:H.108
- 4 x DIO: 1,4-DIETHYLENE DIOXIDE(Non-covalent)
DIO.2: 7 residues within 4Å:- Chain A: F.39, L.40, I.43, F.54, H.73, A.74, V.121
No protein-ligand interaction detected (PLIP)DIO.3: 8 residues within 4Å:- Chain A: W.25, L.28, S.32, I.35, A.36, A.74, M.75, F.78
No protein-ligand interaction detected (PLIP)DIO.5: 9 residues within 4Å:- Chain B: F.39, L.40, I.43, F.54, L.70, H.73, A.74, V.77, V.121
No protein-ligand interaction detected (PLIP)DIO.6: 8 residues within 4Å:- Chain B: W.25, L.28, S.32, I.35, A.36, A.74, M.75, F.78
1 PLIP interactions:1 interactions with chain B- Water bridges: B:M.75
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Smagghe, B.J. et al., Role of Phenylalanine B10 in Plant Nonsymbiotic Hemoglobins. Biochemistry (2006)
- Release Date
- 2006-04-25
- Peptides
- Non-symbiotic hemoglobin 1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 4 x DIO: 1,4-DIETHYLENE DIOXIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Smagghe, B.J. et al., Role of Phenylalanine B10 in Plant Nonsymbiotic Hemoglobins. Biochemistry (2006)
- Release Date
- 2006-04-25
- Peptides
- Non-symbiotic hemoglobin 1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B