SMTL ID : 2gqf.3 (2 other biounits)

Crystal structure of flavoprotein HI0933 from Haemophilus influenzae Rd

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: S.278, Q.281, I.286, R.289 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.278, A:S.278, A:Q.281 Salt bridges: A:R.289 SO4.3: 4 residues within 4Å: Chain B: S.278, Q.281, I.286, R.289 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.278, B:S.278, B:Q.281 Salt bridges: B:R.289 SO4.5: 4 residues within 4Å: Chain C: S.278, Q.281, I.286, R.289 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:S.278, C:S.278, C:Q.281 Salt bridges: C:R.289 SO4.7: 4 residues within 4Å: Chain D: S.278, Q.281, I.286, R.289 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:S.278, D:S.278, D:Q.281 Salt bridges: D:R.289

4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.2: 34 residues within 4Å: Chain A: I.10, G.11, A.12, G.13, A.14, A.15, G.16, F.33, D.34, N.35, R.41, K.42, M.45, S.46, G.47, N.52, S.130, E.131, V.132, A.163, T.164, G.165, S.168, M.169, T.175, F.177, E.342, V.343, G.370, E.371, G.381, Y.382, N.383, F.384 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:E.342 Hydrogen bonds: A:A.14, A:A.15, A:G.16, A:N.35, A:N.35, A:R.41, A:R.41, A:G.47, A:N.52, A:N.52, A:V.132, A:V.132, A:G.165, A:E.371, A:E.371, A:G.381, A:N.383, A:F.384 Water bridges: A:G.13, A:G.166, A:G.380, A:G.380 Salt bridges: A:K.42 pi-Stacking: A:F.384 FAD.4: 34 residues within 4Å: Chain B: I.10, G.11, A.12, G.13, A.14, A.15, G.16, F.33, D.34, N.35, R.41, K.42, M.45, S.46, G.47, N.52, S.130, E.131, V.132, A.163, T.164, G.165, S.168, M.169, T.175, F.177, E.342, V.343, G.370, E.371, G.381, Y.382, N.383, F.384 25 PLIP interactions: 25 interactions with chain B Hydrophobic interactions: B:E.342 Hydrogen bonds: B:A.14, B:A.15, B:G.16, B:N.35, B:N.35, B:R.41, B:R.41, B:G.47, B:N.52, B:N.52, B:V.132, B:V.132, B:G.165, B:E.371, B:E.371, B:G.381, B:N.383, B:F.384 Water bridges: B:G.13, B:G.166, B:G.380, B:G.380 Salt bridges: B:K.42 pi-Stacking: B:F.384 FAD.6: 34 residues within 4Å: Chain C: I.10, G.11, A.12, G.13, A.14, A.15, G.16, F.33, D.34, N.35, R.41, K.42, M.45, S.46, G.47, N.52, S.130, E.131, V.132, A.163, T.164, G.165, S.168, M.169, T.175, F.177, E.342, V.343, G.370, E.371, G.381, Y.382, N.383, F.384 24 PLIP interactions: 24 interactions with chain C Hydrophobic interactions: C:E.342 Hydrogen bonds: C:A.14, C:A.15, C:G.16, C:N.35, C:N.35, C:R.41, C:R.41, C:G.47, C:N.52, C:N.52, C:V.132, C:V.132, C:G.165, C:E.371, C:G.381, C:N.383, C:F.384 Water bridges: C:G.13, C:G.166, C:G.380, C:G.380 Salt bridges: C:K.42 pi-Stacking: C:F.384 FAD.8: 34 residues within 4Å: Chain D: I.10, G.11, A.12, G.13, A.14, A.15, G.16, F.33, D.34, N.35, R.41, K.42, M.45, S.46, G.47, N.52, S.130, E.131, V.132, A.163, T.164, G.165, S.168, M.169, T.175, F.177, E.342, V.343, G.370, E.371, G.381, Y.382, N.383, F.384 24 PLIP interactions: 24 interactions with chain D Hydrophobic interactions: D:E.342 Hydrogen bonds: D:A.14, D:A.15, D:G.16, D:N.35, D:N.35, D:R.41, D:R.41, D:G.47, D:N.52, D:N.52, D:V.132, D:V.132, D:G.165, D:E.371, D:G.381, D:N.383, D:F.384 Water bridges: D:G.13, D:G.166, D:G.380, D:G.380 Salt bridges: D:K.42 pi-Stacking: D:F.384

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mulichak, A.M. et al., Crystal structure of hypothetical flavoprotein HI0933 from Haemophilus influenzae Rd. To be Published

Release Date

2006-05-30

Peptides

Hypothetical protein HI0933: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Hypothetical protein HI0933

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