- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 1 x CNC: CYANOCOBALAMIN(Non-covalent)
CNC.3: 29 residues within 4Å:- Chain A: N.53, Q.58, L.59, S.61, F.63, A.69, G.85, V.86, S.87, S.89, D.91, N.181, Y.225, D.226, A.227, L.236, N.272, T.285, D.287, Y.324, Y.401, Y.442, Y.449, L.492, R.493, R.494, Y.527, V.572, Y.575
34 PLIP interactions:33 interactions with chain A, 1 Ligand-Ligand interactions- Hydrophobic interactions: A:N.53, A:L.59, A:V.86, A:D.91, A:Y.225, A:Y.225, A:Y.442, A:L.492
- Hydrogen bonds: A:L.59, A:S.61, A:S.87, A:S.87, A:N.181, A:N.181, A:T.285, A:T.285, A:D.287, A:D.287, A:Y.324, A:Y.449, A:R.493, A:R.493, A:Y.575, A:Y.575
- Water bridges: A:N.53, A:N.53, A:N.53, A:G.57, A:S.61, A:G.85, A:V.86, A:R.239
- Salt bridges: A:R.493
- Metal complexes: CNC.3
- 4 x LDA: LAURYL DIMETHYLAMINE-N-OXIDE(Non-covalent)
LDA.4: 7 residues within 4Å:- Chain A: Y.148, V.150, G.166, D.167, K.196, T.197, L.198
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:Y.148, A:K.196, A:L.198
LDA.5: 2 residues within 4Å:- Chain A: V.300, I.301
No protein-ligand interaction detected (PLIP)LDA.6: 4 residues within 4Å:- Chain A: L.564, F.565, D.566, R.580
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:F.565, A:D.566
LDA.7: 9 residues within 4Å:- Chain A: G.141, S.142, N.143, S.144, K.560, I.561, Y.582, T.583, L.584
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:I.561, A:I.561, A:Y.582
- Hydrogen bonds: A:N.143, A:S.144
- Water bridges: A:G.141, A:G.141
- 3 x OCT: N-OCTANE(Non-covalent)
OCT.8: 2 residues within 4Å:- Chain A: T.422, A.423
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:T.422, A:A.423
OCT.9: 1 residues within 4Å:- Chain A: Y.179
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:Y.179
OCT.10: 4 residues within 4Å:- Chain A: W.505, L.507, W.512, I.514
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:L.507, A:W.512, A:I.514
- 2 x HEX: HEXANE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shultis, D.D. et al., Outer membrane active transport: structure of the BtuB:TonB complex. Science (2006)
- Release Date
- 2006-06-13
- Peptides
- Vitamin B12 transporter btuB: A
protein TONB: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 1 x CNC: CYANOCOBALAMIN(Non-covalent)
- 4 x LDA: LAURYL DIMETHYLAMINE-N-OXIDE(Non-covalent)
- 3 x OCT: N-OCTANE(Non-covalent)
- 2 x HEX: HEXANE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shultis, D.D. et al., Outer membrane active transport: structure of the BtuB:TonB complex. Science (2006)
- Release Date
- 2006-06-13
- Peptides
- Vitamin B12 transporter btuB: A
protein TONB: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B - Membrane
-
We predict this structure to be a membrane protein.