SMTL ID : 2gtq.1

Crystal structure of aminopeptidase N from human pathogen Neisseria meningitidis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.293, H.297, E.316 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.293, A:H.297, A:E.316, A:E.316, H2O.410

16 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.636, L.640, R.688 Ligand excluded by PLIP SO4.3: 1 residues within 4Å: Chain A: D.244 Ligand excluded by PLIP SO4.4: 2 residues within 4Å: Chain A: A.191, V.192 Ligand excluded by PLIP SO4.5: 1 residues within 4Å: Chain A: R.330 Ligand excluded by PLIP SO4.6: 2 residues within 4Å: Chain A: L.402, R.406 Ligand excluded by PLIP SO4.7: 2 residues within 4Å: Chain A: A.492, R.499 Ligand excluded by PLIP SO4.8: 3 residues within 4Å: Chain A: G.497, K.498, R.499 Ligand excluded by PLIP SO4.9: 2 residues within 4Å: Chain A: E.521, A.522 Ligand excluded by PLIP SO4.10: 3 residues within 4Å: Chain A: T.565, R.568, R.569 Ligand excluded by PLIP SO4.11: 3 residues within 4Å: Chain A: T.212, A.214, D.215 Ligand excluded by PLIP SO4.12: 2 residues within 4Å: Chain A: R.449, L.450 Ligand excluded by PLIP SO4.13: 2 residues within 4Å: Chain A: A.331, S.332 Ligand excluded by PLIP SO4.14: 2 residues within 4Å: Chain A: R.361, S.437 Ligand excluded by PLIP SO4.15: 4 residues within 4Å: Chain A: F.772, S.773, L.774, E.775 Ligand excluded by PLIP SO4.16: 6 residues within 4Å: Chain A: M.256, G.257, N.268, K.270, F.271, R.781 Ligand excluded by PLIP SO4.17: 3 residues within 4Å: Chain A: Y.372, Y.377, E.378 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocek, B. et al., Crystal structure of aminopeptidase N from human pathogen Neisseria meningitidis. Proteins (2007)

Release Date

2006-05-30

Peptides

aminopeptidase N: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

aminopeptidase N

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