SMTL ID : 2gtx.1 (1 other biounit)

Structural Basis of Catalysis by Mononuclear Methionine Aminopeptidase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 6 residues within 4Å: Chain A: D.105, H.168, T.199, E.201, E.232 Ligands: NLP.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.105, A:H.168, A:E.201, A:E.232

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain A: N.71, V.73, S.228 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.73, A:S.228

1 x NLP: (1-AMINO-PENTYL)-PHOSPHONIC ACID(Non-covalent)

NLP.3: 14 residues within 4Å: Chain A: C.56, Y.59, Y.62, C.67, H.76, D.94, T.96, D.105, H.168, F.174, H.175, E.201, E.232 Ligands: MN.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Y.59, A:Y.62, A:F.174 Hydrogen bonds: A:H.76, A:T.96, A:T.96 Water bridges: A:Q.230

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ye, Q.Z. et al., Structural basis of catalysis by monometalated methionine aminopeptidase. Proc.Natl.Acad.Sci.Usa (2006)

Release Date

2006-07-04

Peptides

Methionine aminopeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Methionine aminopeptidase

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