SMTL ID : 2gza.1

Crystal structure of the VirB11 ATPase from the Brucella Suis type IV secretion system in complex with sulphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-hexamer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: E.183, T.184, G.185, S.186, G.187, K.188, H.285 Chain F: R.101 8 PLIP interactions: 7 interactions with chain A, 1 interactions with chain F Hydrogen bonds: A:G.185, A:S.186, A:G.187, A:K.188 Water bridges: A:T.189 Salt bridges: A:K.188, A:H.285, F:R.101 SO4.2: 9 residues within 4Å: Chain A: R.120 Chain B: E.183, T.184, G.185, S.186, G.187, K.188, T.189, H.285 7 PLIP interactions: 6 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:G.185, B:S.186, B:G.187, B:K.188, B:T.189 Salt bridges: B:K.188, A:R.120 SO4.3: 7 residues within 4Å: Chain C: E.183, T.184, G.185, S.186, G.187, K.188, T.189 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:G.185, C:S.186, C:G.187, C:K.188, C:T.189, C:T.189, C:T.189 Salt bridges: C:K.188 SO4.4: 8 residues within 4Å: Chain C: R.101 Chain D: E.183, T.184, G.185, S.186, G.187, K.188, H.285 8 PLIP interactions: 7 interactions with chain D, 1 interactions with chain C Hydrogen bonds: D:G.185, D:S.186, D:G.187, D:K.188 Water bridges: D:T.189 Salt bridges: D:K.188, D:H.285, C:R.101 SO4.5: 9 residues within 4Å: Chain D: R.120 Chain E: E.183, T.184, G.185, S.186, G.187, K.188, T.189, H.285 8 PLIP interactions: 7 interactions with chain E, 1 interactions with chain D Hydrogen bonds: E:G.185, E:S.186, E:G.187, E:K.188, E:T.189, E:T.189 Salt bridges: E:K.188, D:R.120 SO4.6: 7 residues within 4Å: Chain F: E.183, T.184, G.185, S.186, G.187, K.188, T.189 7 PLIP interactions: 7 interactions with chain F Hydrogen bonds: F:G.185, F:S.186, F:G.187, F:K.188, F:T.189, F:T.189 Salt bridges: F:K.188

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hare, S. et al., A Large Domain Swap in the VirB11 ATPase of Brucella suis Leaves the Hexameric Assembly Intact. J.Mol.Biol. (2006)

Release Date

2006-07-11

Peptides

Type IV secretion system protein VirB11: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

Type IV secretion system protein VirB11