SMTL ID : 2gzd.1

Crystal Structure of Rab11 in Complex with Rab11-FIP2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.44 Å

Oligo State

hetero-2-2-mer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: S.25, T.43, D.66 Ligands: GTP.2 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.25, A:T.43, H2O.1 MG.3: 4 residues within 4Å: Chain B: S.25, T.43, D.66 Ligands: GTP.4 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:S.25, B:T.43, H2O.3

2 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

GTP.2: 25 residues within 4Å: Chain A: D.19, S.20, G.21, V.22, G.23, K.24, S.25, N.26, F.36, N.37, L.38, S.40, K.41, S.42, T.43, A.68, G.69, N.124, K.125, D.127, L.128, S.154, A.155, L.156 Ligands: MG.1 22 PLIP interactions: 22 interactions with chain A Hydrogen bonds: A:G.21, A:G.23, A:K.24, A:S.25, A:N.26, A:N.26, A:N.37, A:S.40, A:K.41, A:T.43, A:T.67, A:G.69, A:N.124, A:K.125, A:K.125, A:A.155, A:L.156 Salt bridges: A:K.24, A:K.24, A:D.127 pi-Stacking: A:F.36, A:F.36 GTP.4: 24 residues within 4Å: Chain B: D.19, S.20, G.21, V.22, G.23, K.24, S.25, N.26, F.36, N.37, L.38, S.40, S.42, T.43, A.68, G.69, N.124, K.125, D.127, L.128, S.154, A.155, L.156 Ligands: MG.3 23 PLIP interactions: 23 interactions with chain B Hydrogen bonds: B:G.21, B:G.23, B:K.24, B:S.25, B:N.26, B:N.26, B:N.37, B:S.40, B:K.41, B:S.42, B:T.43, B:G.69, B:N.124, B:K.125, B:K.125, B:A.155, B:L.156 Water bridges: B:S.25 Salt bridges: B:K.24, B:K.24, B:D.127 pi-Stacking: B:F.36, B:F.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jagoe, W.N. et al., Crystal structure of rab11 in complex with rab11 family interacting protein 2. Structure (2006)

Release Date

2006-08-15

Peptides

Ras-related protein Rab-11A: AB
Rab11 family-interacting protein 2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Ras-related protein Rab-11A

Rab11 family-interacting protein 2

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