SMTL ID : 2gzm.3 (2 other biounits)

Crystal Structure of the Glutamate Racemase from Bacillus anthracis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

homo-tetramer

Ligands

4 x DGL: D-GLUTAMIC ACID(Non-covalent)

DGL.1: 14 residues within 4Å: Chain A: D.10, S.11, C.40, P.41, Y.42, G.43, C.73, N.74, T.75, T.117, V.148, C.184, T.185, H.186 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:V.148 Hydrogen bonds: A:S.11, A:S.11, A:Y.42, A:G.43, A:N.74, A:N.74, A:T.75, A:T.185, A:T.185, A:T.185, A:T.185 Water bridges: A:S.11 DGL.2: 14 residues within 4Å: Chain B: D.10, S.11, C.40, P.41, Y.42, G.43, C.73, N.74, T.75, T.117, V.148, C.184, T.185, H.186 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:V.148 Hydrogen bonds: B:S.11, B:Y.42, B:G.43, B:N.74, B:N.74, B:T.75, B:T.75, B:T.120, B:T.185, B:T.185, B:T.185, B:T.185 DGL.3: 14 residues within 4Å: Chain C: D.10, S.11, C.40, P.41, Y.42, G.43, C.73, N.74, T.75, T.117, V.148, C.184, T.185, H.186 11 PLIP interactions: 11 interactions with chain C Hydrophobic interactions: C:V.148 Hydrogen bonds: C:S.11, C:Y.42, C:G.43, C:N.74, C:N.74, C:T.75, C:T.185, C:T.185, C:T.185 Water bridges: C:G.12 DGL.4: 14 residues within 4Å: Chain D: D.10, S.11, C.40, P.41, Y.42, G.43, C.73, N.74, T.75, T.117, V.148, C.184, T.185, H.186 15 PLIP interactions: 15 interactions with chain D Hydrophobic interactions: D:V.148 Hydrogen bonds: D:S.11, D:S.11, D:Y.42, D:G.43, D:N.74, D:N.74, D:T.75, D:T.75, D:T.117, D:T.185, D:T.185, D:T.185 Water bridges: D:G.15, D:T.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

May, M. et al., Structural and functional analysis of two glutamate racemase isozymes from Bacillus anthracis and implications for inhibitor design. J.Mol.Biol. (2007)

Release Date

2007-05-29

Peptides

Glutamate racemase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Glutamate racemase

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