SMTL ID : 2h1l.1 (1 other biounit)

The Structure of the Oncoprotein SV40 Large T Antigen and p53 Tumor Suppressor Complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.16 Å

Oligo State

hetero-6-6-mer

Ligands

12 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.45, C.48, H.56, H.60 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.45, A:C.48, A:H.56, A:H.60 ZN.2: 4 residues within 4Å: Chain B: C.45, C.48, H.56, H.60 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.45, B:C.48, B:H.56, B:H.60 ZN.3: 4 residues within 4Å: Chain C: C.45, C.48, H.56, H.60 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.45, C:C.48, C:H.56, C:H.60 ZN.4: 4 residues within 4Å: Chain D: C.45, C.48, H.56, H.60 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:C.48, D:H.60 ZN.5: 4 residues within 4Å: Chain E: C.45, C.48, H.56, H.60 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:C.45, E:C.48, E:H.56, E:H.60 ZN.6: 4 residues within 4Å: Chain F: C.45, C.48, H.56, H.60 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:C.45, F:C.48, F:H.56, F:H.60 ZN.7: 4 residues within 4Å: Chain G: C.87, H.90, C.149, C.153 4 PLIP interactions: 4 interactions with chain G Metal complexes: G:C.87, G:H.90, G:C.149, G:C.153 ZN.8: 4 residues within 4Å: Chain H: C.87, H.90, C.149, C.153 4 PLIP interactions: 4 interactions with chain H Metal complexes: H:C.87, H:H.90, H:C.149, H:C.153 ZN.9: 4 residues within 4Å: Chain I: C.87, H.90, C.149, C.153 4 PLIP interactions: 4 interactions with chain I Metal complexes: I:C.87, I:H.90, I:C.149, I:C.153 ZN.10: 5 residues within 4Å: Chain J: C.87, H.90, C.149, N.150, C.153 4 PLIP interactions: 4 interactions with chain J Metal complexes: J:C.87, J:H.90, J:C.149, J:C.153 ZN.11: 4 residues within 4Å: Chain K: C.87, H.90, C.149, C.153 4 PLIP interactions: 4 interactions with chain K Metal complexes: K:C.87, K:H.90, K:C.149, K:C.153 ZN.12: 4 residues within 4Å: Chain L: C.87, H.90, C.149, C.153 4 PLIP interactions: 4 interactions with chain L Metal complexes: L:C.87, L:H.90, L:C.149, L:C.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lilyestrom, W. et al., Crystal structure of SV40 large T-antigen bound to p53: interplay between a viral oncoprotein and a cellular tumor suppressor. Genes Dev. (2006)

Release Date

2006-09-12

Peptides

Large T antigen: ABCDEF
Cellular tumor antigen p53: GHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
M

H
N

I
O

J
P

K
Q

L
R

Large T antigen

Cellular tumor antigen p53

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