SMTL ID : 2h6l.1

X-Ray Crystal Structure of the Metal-containing Protein AF0104 from Archaeoglobus fulgidus. Northeast Structural Genomics Consortium Target GR103.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-trimer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: Y.61, H.89, H.91, H.104 Ligands: ACY.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:H.89, A:H.91, A:H.104, ACY.2 ZN.3: 5 residues within 4Å: Chain B: Y.61, H.89, H.91, H.104 Ligands: ACY.4 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Ligand interactions Metal complexes: B:H.89, B:H.91, B:H.104, ACY.4 ZN.5: 5 residues within 4Å: Chain C: Y.61, H.89, H.91, H.104 Ligands: ACY.6 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Ligand interactions Metal complexes: C:H.89, C:H.91, C:H.104, ACY.6

3 x ACY: ACETIC ACID(Non-functional Binders)

ACY.2: 9 residues within 4Å: Chain A: Y.54, Y.61, H.89, H.91, H.104, L.135 Chain C: G.44, E.71 Ligands: ZN.1 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:H.91, A:H.104 ACY.4: 9 residues within 4Å: Chain A: G.44, A.45, E.71 Chain B: Y.54, Y.61, H.89, H.91, H.104 Ligands: ZN.3 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:H.91, B:H.104 ACY.6: 9 residues within 4Å: Chain B: G.44, A.45, E.71 Chain C: Y.54, Y.61, H.89, H.91, H.104 Ligands: ZN.5 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:Y.61 Salt bridges: C:H.91, C:H.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuzin, A.P. et al., Three dimensional structure of the hypothetical protein AF0104 at the 2.0 A resolution. To be Published

Release Date

2006-07-25

Peptides

Hypothetical protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Hypothetical protein