SMTL ID : 2h7v.2 (1 other biounit)

Co-crystal structure of YpkA-Rac1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: T.21, T.39, D.61 Ligands: GDP.2 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:T.21, A:T.39

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 18 residues within 4Å: Chain A: D.15, G.16, A.17, V.18, G.19, K.20, T.21, C.22, F.32, I.37, T.39, K.120, D.122, L.123, S.162, A.163, L.164 Ligands: MG.1 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:A.17, A:V.18, A:G.19, A:K.20, A:T.21, A:T.21, A:C.22, A:K.120, A:A.163, A:L.164 Salt bridges: A:K.20, A:D.122 pi-Stacking: A:F.32

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Prehna, G. et al., Yersinia virulence depends on mimicry of host rho-family nucleotide dissociation inhibitors. Cell(Cambridge,Mass.) (2006)

Release Date

2006-09-19

Peptides

Migration-inducing protein 5: A
Protein kinase ypkA: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Migration-inducing protein 5

Protein kinase ypkA

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