SMTL ID : 2hae.1

Crystal structure of a putative malic enzyme (malate oxidoreductase)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.13 Å

Oligo State

homo-tetramer

Ligands

3 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 18 residues within 4Å: Chain B: A.135, T.161, N.188, G.189, I.190, G.191, A.192, A.193, D.213, R.214, V.260, S.261, R.262, I.265, L.283, A.284, N.285, N.316 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:N.285 Hydrogen bonds: B:T.161, B:N.188, B:I.190, B:A.192, B:A.193, B:R.214, B:S.261, B:R.262, B:R.262, B:N.285, B:N.285, B:N.316, B:N.316 Water bridges: B:A.135, B:G.191, B:G.194 NAD.2: 19 residues within 4Å: Chain A: A.135, T.161, N.188, G.189, I.190, G.191, A.192, A.193, V.212, D.213, R.214, V.260, S.261, R.262, I.265, L.283, A.284, N.285, N.316 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:T.161, A:N.188, A:I.190, A:A.192, A:A.193, A:R.214, A:S.261, A:R.262, A:R.262, A:N.285, A:N.285, A:N.316, A:N.316 Water bridges: A:G.191, A:G.191 NAD.3: 20 residues within 4Å: Chain C: T.161, N.188, G.189, I.190, G.191, A.192, A.193, G.194, V.212, D.213, R.214, V.260, S.261, R.262, I.265, L.283, A.284, N.285, V.314, N.316 12 PLIP interactions: 12 interactions with chain C Hydrophobic interactions: C:N.285 Hydrogen bonds: C:T.161, C:N.188, C:I.190, C:A.192, C:A.193, C:G.194, C:R.214, C:S.261, C:R.262, C:N.285 Water bridges: C:G.191

1 x ZN: ZINC ION(Non-covalent)

ZN.4: 5 residues within 4Å: Chain D: K.89, E.131, D.132, D.157, N.316 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:E.131, D:D.132, D:D.157

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seetharaman, J. et al., Crystal structure of a putative malic enzyme (malate oxidoreductase). To be Published

Release Date

2006-07-04

Peptides

Malate oxidoreductase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Malate oxidoreductase