SMTL ID : 2hc0.1

Structure of HIV protease 6X mutant in complex with AB-2.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

homo-dimer

Ligands

12 x BR: BROMIDE ION(Non-covalent)

BR.1: 3 residues within 4Å: Chain A: G.73, T.74, N.88 Ligand excluded by PLIP BR.2: 1 residues within 4Å: Chain A: W.6 Ligand excluded by PLIP BR.3: 2 residues within 4Å: Chain A: I.54, K.55 Ligand excluded by PLIP BR.4: 3 residues within 4Å: Chain B: I.47, G.48 Ligands: AB2.6 Ligand excluded by PLIP BR.5: 1 residues within 4Å: Chain A: A.82 Ligand excluded by PLIP BR.7: 3 residues within 4Å: Chain B: G.73, T.74, N.88 Ligand excluded by PLIP BR.8: 2 residues within 4Å: Chain B: Q.18, L.19 Ligand excluded by PLIP BR.9: 2 residues within 4Å: Chain B: K.7, R.8 Ligand excluded by PLIP BR.10: 1 residues within 4Å: Chain B: W.6 Ligand excluded by PLIP BR.11: 2 residues within 4Å: Chain B: K.20, E.21 Ligand excluded by PLIP BR.12: 3 residues within 4Å: Chain B: Q.61, I.72, G.73 Ligand excluded by PLIP BR.13: 2 residues within 4Å: Chain B: I.93, G.94 Ligand excluded by PLIP

1 x AB2: [1-((1S,2R)-1-BENZYL-2-HYDROXY-3-{ISOBUTYL[(4-METHOXYPHENYL)SULFONYL]AMINO}PROPYL)-1H-1,2,3-TRIAZOL-4-YL]METHYL (1R,2R)-2-HYDROXY-2,3-DIHYDRO-1H-INDEN-1-YLCARBAMATE(Non-covalent)

AB2.6: 25 residues within 4Å: Chain A: D.25, G.27, A.28, D.29, I.47, G.48, G.49, I.50, A.82, I.84 Chain B: R.8, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, T.80, P.81, I.84 Ligands: BR.4 16 PLIP interactions: 10 interactions with chain B, 6 interactions with chain A Hydrophobic interactions: B:A.28, B:V.32, B:P.81, B:I.84, A:I.50, A:A.82 Hydrogen bonds: B:D.25, B:D.29, B:D.30, B:I.50, A:G.48 Salt bridges: B:D.25, A:D.25 pi-Cation interactions: B:R.8 Water bridges: A:I.50, A:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Heaslet, H. et al., Structure of HIV Protease 6X Mutant in complex with AB-2. To be Published

Release Date

2007-06-26

Peptides

Protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protease

Related Entries With Identical Sequence